Inferring structural variant cancer cell fraction

- Cmero, Marek, Yuan, Ke, Cao, Shaolong, Scarlett, Christopher J., Christie, Elizabeth L., Cun, Yupeng, Dawson, Kevin J., Demeulemeester, Jonas, Dentro, Stefan C., Deshwar, Amit G., Donmez, Nilgun, Drews, Ruben M., Eils, Roland, Ong, Cheng Soon, Fan, Y, Fittall, MW, Garsed, DW, Gerstung, M, Getz, G, Gonzalez, S, Ha, G, Haase, K, Imielinski, M, Jerman, L, Schröder, Jan, Ji, Y, Jolly, C, Kleinheinz, K, Lee, J, Lee-Six, H, Leshchiner, I, Livitz, D, Malikic, S, Martincorena, I, Mitchell, TJ, Adams, David J., Morris, QD, Mustonen, V, Oesper, L, Peifer, M, Peto, M, Raphael, BJ, Rosebrock, D, Rubanova, Y, Sahinalp, SC, Salcedo, A, Anur, Pavana, Schlesner, M, Schumacher, SE, Sengupta, S, Shi, R, Shin, SJ, Spellman, PT, Spiro, O, Stein, LD, Tarabichi, M, Van Loo, P, Beroukhim, Rameen, Vembu, S, Vázquez-García, I, Wang, W, Wedge, DC, Wheeler, DA, Wintersinger, JA, Yang, TP, Yao, X, Yu, K, Zhu, H, Boutros, Paul C., Corcoran, NM, Papenfuss, T, Hovens, CM, Markowetz, F, Macintyre, G, Aaltonen, LA, Abascal, F, Abeshouse, A, Aburatani, H, Adams, DJ, Bowtell, David D. L., Agrawal, N, Ahn, KS, Ahn, SM, Aikata, H, Akbani, R, Akdemir, KC, Al-Ahmadie, H, Al-Sedairy, ST, Al-Shahrour, F, Alawi, M, Campbell, Peter J., Albert, M, Aldape, K, Alexandrov, LB, Ally, A, Alsop, K, Alvarez, EG, Amary, F, Amin, SB, Aminou, B, Ammerpohl, O

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

- Bailey, Matthew H., Perry, MD, Puiggros, M, Raine, KM, Rheinbay, E, Royo, R, Sahinalp, SC, Saksena, G, Sarrafi, I, Schlesner, M, Simpson, JT, Stebbings, L, Stewart, C, Stobbe, MD, Teague, JW, Tiao, G, Torrents, D, Wala, JA, Wang, J, Wang, W, Waszak, SM, Weischenfeldt, J, Wendl, MC, Werner, J, Wu, Z, Xue, H, Yakneen, S, Yamaguchi, TN, Ye, K, Yellapantula, VD, Yung, CK, Zhang, J, Pedersen, JS, Puiggròs, M, Wendl, M, Ellrot, K, Wheeler, DA, Getz, G, Gerstein, MB, Ding, L, Aaltonen, LA, Abascal, F, Abeshouse, A, Aburatani, H, Adams, DJ, Agrawal, N, Ahn, KS, Ahn, S-M, Aikata, H, Akbani, R, Akdemir, KC, Al-Ahmadie, H, Al-Sedairy, ST, Al-Shahrour, F, Alawi, M, Albert, M, Aldape, K, Alexandrov, LB, Ally, A, Alsop, K, Alvarez, EG, Amary, F, Amin, SB, Aminou, B, Ammerpohl, O, Anderson, MJ, Ang, Y, Antonello, D, Anur, P, Aparicio, S, Meyerson, William U., Bailey, MH, Buchanan, A, Chiotti, K, Covington, K, Creason, A, Ellrott, K, Fan, Y, Foltz, S, Dursi, Lewis Jonathan, Hale, W, Haussler, D, Hess, JM, Hutter, CM, Kandoth, C, Kasaian, K, Kasapi, M, Larson, D, Leshchiner, I, Wang, Liang-Bo, Letaw, J, Ma, S, McLellan, MD, Men, Y, Mills, GB, Niu, B, Peto, M, Radenbaugh, A, Reynolds, SM, Dong, Guanlan, Sofia, H, Struck, AJ, Stuart, JM, Weinstein, JN, Wong, CK, Xi, L, Liang, Wen-Wei, Bieg, M, Boutros, PC, Buchhalter, I, Butler, AP, Chen, K, Chong, Z, Drechsel, O, Weerasinghe, Amila, Jonathan Dursi, L, Eils, R, Espiritu, SMG, Fulton, RS, Gao, S, Gelpi, JLL, Gonzalez, S, Li, Shantao, Gut, IG, Hach, F, Heinold, MC, Hinton, J, Hu, T, Huang, V, Huang, Y, Hutter, B, Jones, DR, Kelso, Sean, Jung, J, Jäger, N, Kim, HL, Kleinheinz, K, Kumar, S, Kumar, Y, Lalansingh, CM, Letunic, I, Livitz, D, Ma, EZ, Maruvka, YE, Mashl, RJ, Menzies, A, Milovanovic, A, Nielsen, MM, Ossowski, S, Paramasivam, N, Scarlett, Christopher J.